atm624@cornell.edu
bwangty@bu.edu
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收稿日期:2024-06-23,
修回日期:2024-08-28,
录用日期:2024-09-20,
网络出版日期:2024-11-01,
纸质出版日期:2024-12
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A large field-of-view, single-cell-resolution two- and three-photon microscope for deep and wide imaging[J]. eLight, 2024,4.
Aaron T. Mok, Tianyu Wang, Shitong Zhao, et al. A large field-of-view, single-cell-resolution two- and three-photon microscope for deep and wide imaging[J]. Elight, 2024, 4.
A large field-of-view, single-cell-resolution two- and three-photon microscope for deep and wide imaging[J]. eLight, 2024,4. DOI: 10.1186/s43593-024-00076-4.
Aaron T. Mok, Tianyu Wang, Shitong Zhao, et al. A large field-of-view, single-cell-resolution two- and three-photon microscope for deep and wide imaging[J]. Elight, 2024, 4. DOI: 10.1186/s43593-024-00076-4.
In vivo imaging of large-scale neuronal activity plays a pivotal role in unraveling the function of the brain's circuitry. Multiphoton microscopy
a powerful tool for deep-tissue imaging
has received sustained interest in advancing its speed
field of view and imaging depth. However
to avoid thermal damage in scattering biological tissue
field of view decreases exponentially as imaging depth increases. We present a suite of innovations to optimize three-photon microscopy for large field-of-view imaging at depths unreachable by two-photon microscopy. These techniques enable us to image neuronal activities of transgenic animals expressing protein calcium sensors in a ~ 3.5-mm diameter field-of-view with single-cell resolution in the deepest cortical layer of mouse brains. We further demonstrate simultaneous large field-of-view two-photon and three-photon imaging
subcortical imaging in the mouse brain
and whole-brain imaging in adult zebrafish. The demonstrated techniques can be integrated into typical multiphoton microscopes to enlarge field of view for system-level neural circuit research.
N.J. Sofroniew , D. Flickinger , J. King , K. Svoboda , A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging . Elife 5 , e14472 ( 2016 ). http://doi.org/10.7554/eLife.14472 http://doi.org/10.7554/eLife.14472
C.H. Yu , Y. Yu , L.M. Adsit , J.T. Chang , J. Barchini , A.H. Moberly , H. Benisty , J. Kim , B.K. Young , K. Heng , D.M. Farinella , A. Leikvoll , R. Pavan , R. Vistein , B.R. Nanfito , D.G.C. Hildebrand , S. Otero-Coronel , A. Vaziri , J.L. Goldberg , A.J. Ricci , D. Fitzpatrick , J.A. Cardin , M.J. Higley , G.B. Smith , P. Kara , K.J. Nielsen , I.T. Smith , S.L.V. Smith , The Cousa objective: a long-working distance air objective for multiphoton imaging in vivo . Nat. Methods 21 , 132 - 141 ( 2024 ). http://doi.org/10.1038/s41592-023-02098-1 http://doi.org/10.1038/s41592-023-02098-1
S. Weisenburger , F. Tejera , J. Demas , B. Chen , J. Manley , F.T. Sparks , F. Martínez Traub , T. Daigle , H. Zeng , A. Losonczy , A. Vaziri , Volumetric Ca2+ imaging in the mouse brain using hybrid multiplexed sculpted light microscopy . Cell 177 , 1 - 17 ( 2019 ). http://doi.org/10.1016/j.cell.2019.03.011 http://doi.org/10.1016/j.cell.2019.03.011
J. Demas , J. Manley , F. Tejera , K. Barber , H. Kim , F.M. Traub , B. Chen , A. Vaziri , High-speed, cortex-wide volumetric recording of neuroactivity at cellular resolution using light beads microscopy . Nat. Methods 18 , 1103 - 1111 ( 2021 ). http://doi.org/10.1038/s41592-021-01239-8 http://doi.org/10.1038/s41592-021-01239-8
C.H. Yu , J.N. Stirman , Y. Yu , R. Hira , S.L. Smith , Diesel2p mesoscope with dual independent scan engines for flexible capture of dynamics in distributed neural circuitry . Nat. Commun. 12 , 1 - 13 ( 2021 ). http://doi.org/10.1038/s41467-021-26736-4 http://doi.org/10.1038/s41467-021-26736-4
K. Ota , Y. Oisi , T. Suzuki , M. Ikeda , Y. Ito , T. Ito , H. Uwamori , K. Kobayashi , M. Kobayashi , M. Odagawa , C. Matsubara , Y. Kuroiwa , M. Horikoshi , J. Matsushita , H. Hioki , M. Ohkura , J. Nakai , M. Oizumi , A. Miyawaki , T. Aonishi , T. Ode , M. Murayama , Fast, cell-resolution, contiguous-wide two-photon imaging to reveal functional network architectures across multi-modal cortical areas . Neuron 109 , 1 - 15 ( 2021 ). http://doi.org/10.1016/j.neuron.2021.03.032 http://doi.org/10.1016/j.neuron.2021.03.032
O.I. Rumyantsev , J.A. Lecoq , O. Hernandez , Y. Zhang , J. Savall , R. Chrapkiewicz , J. Li , H. Zeng , S. Ganguli , M.J. Schnitzer , Fundamental bounds on the fidelity of sensory cortical coding . Nature 580 , 100 - 105 ( 2020 ). http://doi.org/10.1038/s41586-020-2130-2 http://doi.org/10.1038/s41586-020-2130-2
R. Lu , Y. Liang , G. Meng , P. Zhou , K. Svoboda , L. Paninski , N. Ji , Rapid mesoscale volumetric imaging of neural activity with synaptic resolution . Nat. Methods 17 , 291 - 294 ( 2020 ). http://doi.org/10.1038/s41592-020-0760-9 http://doi.org/10.1038/s41592-020-0760-9
J.N. Stirman , I.T. Smith , M.W. Kudenov , S.L. Smith , Wide field-of-view, multi-region, two-photon imaging of neuronal activity in the mammalian brain . Nat. Biotechnol. 34 , 857 - 862 ( 2016 ). http://doi.org/10.1038/nbt.3594 http://doi.org/10.1038/nbt.3594
M. Clough , I.A. Chen , S.-W. Park , A.M. Ahrens , J.N. Stirman , S.L. Smith , J.L. Chen , Flexible simultaneous mesoscale two-photon imaging of neural activity at high speeds . Nat. Commun. 12 , 1 - 7 ( 2021 ). http://doi.org/10.1038/s41467-021-26737-3 http://doi.org/10.1038/s41467-021-26737-3
P.S. Tsai , C. Mateo , J.J. Field , C.B. Schaffer , M.E. Anderson , D. Kleinfeld , Ultra-large field-of-view two-photon microscopy . Opt. Express 23 , 13833 - 13847 ( 2015 ). http://doi.org/10.1364/OE.23.013833 http://doi.org/10.1364/OE.23.013833
F.K. Janiak , P. Bartel , M.R. Bale , T. Yoshimatsu , E. Komulainen , M. Zhou , K. Staras , L.L. Prieto-Godino , T. Euler , M. Maravall , T. Baden , Non-telecentric two-photon microscopy for 3D random access mesoscale imaging . Nat. Commun. 13 , 544 ( 2022 ). http://doi.org/10.1038/s41467-022-28192-0 http://doi.org/10.1038/s41467-022-28192-0
K. Takasaki , R. Abbasi-asl , J. Waters , Superficial bound of the depth limit of two- photon imaging in mouse brain . eNeuro 7 , 1 - 10 ( 2020 ). http://doi.org/10.1523/ENEURO.0255-19.2019 http://doi.org/10.1523/ENEURO.0255-19.2019
M. Yildirim , H. Sugihara , P.T.C. So , M. Sur , Functional imaging of visual cortical layers and subplate in awake mice with optimized three-photon microscopy . Nat. Commun. 10 , 177 ( 2019 ). http://doi.org/10.1038/s41467-018-08179-6 http://doi.org/10.1038/s41467-018-08179-6
D.G. Ouzounov , T. Wang , M. Wang , D.D. Feng , N.G. Horton , J.C. Cruz-Hernández , Y.-T. Cheng , J. Reimer , A.S. Tolias , N. Nishimura , C. Xu , In vivo three-photon imaging of activity of GCaMP6-labeled neurons deep in intact mouse brain . Nat. Methods 14 , 388 - 390 ( 2017 ). http://doi.org/10.1038/nmeth.4183 http://doi.org/10.1038/nmeth.4183
M.A. Thornton , G.L. Futia , M.E. Stockton , S.A. Budoff , A.N. Ramirez , B. Ozbay , O. Tzang , K. Kilborn , A. Poleg-Polsky , D. Restrepo , E.A. Gibson , E.G. Hughes , Long-term in vivo three-photon imaging reveals region-specific differences in healthy and regenerative oligodendrogenesis . Nat. Neurosci. 27 , 846 - 861 ( 2024 ). http://doi.org/10.1038/s41593-024-01613-7 http://doi.org/10.1038/s41593-024-01613-7
T. Wang , C. Xu , Three-photon neuronal imaging in deep mouse brain . Optica 7 , 947 - 960 ( 2020 ). http://doi.org/10.1364/OPTICA.395825 http://doi.org/10.1364/OPTICA.395825
Y. Hontani , F. Xia , C. Xu , Multicolor three-photon fluorescence imaging with single-wavelength excitation deep in mouse brain . Sci. Adv. 7 , 3531 - 3548 ( 2021 ). http://doi.org/10.1126/sciadv.abf3531 http://doi.org/10.1126/sciadv.abf3531
C. Zhao , S. Chen , L. Zhang , D. Zhang , R. Wu , Y. Hu , F. Zeng , Y. Li , D. Wu , F. Yu , Y. Zhang , J. Zhang , L. Chen , A. Wang , H. Cheng , Miniature three-photon microscopy maximized for scattered fluorescence collection . Nat. Methods 20 , 617 - 622 ( 2023 ). http://doi.org/10.1038/s41592-023-01777-3 http://doi.org/10.1038/s41592-023-01777-3
A. Klioutchnikov , D.J. Wallace , J. Sawinski , K.M. Voit , Y. Groemping , J.N.D. Kerr , A three-photon head-mounted microscope for imaging all layers of visual cortex in freely moving mice . Nat. Methods 20 , 610 - 616 ( 2023 ). http://doi.org/10.1038/s41592-022-01688-9 http://doi.org/10.1038/s41592-022-01688-9
A. Klioutchnikov , D.J. Wallace , M.H. Frosz , R. Zeltner , J. Sawinski , V. Pawlak , K.M. Voit , P.S.J. Russell , J.N.D. Kerr , Three-photon head-mounted microscope for imaging deep cortical layers in freely moving rats . Nat. Methods 17 , 509 - 513 ( 2020 ). http://doi.org/10.1038/s41592-020-0817-9 http://doi.org/10.1038/s41592-020-0817-9
C. Xu , W.W. Webb , Multiphoton excitation of molecular fluorophores and nonlinear laser microscopy . Topics in fluorescence spectroscopy 471 - 540 ( Springer , 2002 ). http://doi.org/10.1007/0-306-47070-5_11 http://doi.org/10.1007/0-306-47070-5_11
Y. Li , S.J. Montague , A. Brüstle , X. He , C. Gillespie , K. Gaus , E.E. Gardiner , W.M. Lee , High contrast imaging and flexible photomanipulation for quantitative in vivo multiphoton imaging with polygon scanning microscope . J. Biophotonics 11 , 1 - 12 ( 2018 ). http://doi.org/10.1002/jbio.201700341 http://doi.org/10.1002/jbio.201700341
Y.X. Li , V. Gautam , A. Brüstle , I.A. Cockburn , V.R. Daria , C. Gillespie , K. Gaus , C. Alt , W.M. Lee , Flexible polygon-mirror based laser scanning microscope platform for multiphoton in-vivo imaging . J. Biophotonics 10 , 1526 - 1537 ( 2017 ). http://doi.org/10.1002/jbio.201600289 http://doi.org/10.1002/jbio.201600289
B. Li , C. Wu , M. Wang , K. Charan , C. Xu , An adaptive excitation source for high-speed multiphoton microscopy . Nat. Methods 17 , 163 - 166 ( 2020 ). http://doi.org/10.1038/s41592-019-0663-9 http://doi.org/10.1038/s41592-019-0663-9
B.A. Wilt , J.E. Fitzgerald , M.J. Schnitzer , Photon shot noise limits on optical detection of neuronal spikes and estimation of spike timing . Biophys. J. 104 , 51 - 62 ( 2013 ). http://doi.org/10.1016/j.bpj.2012.07.058 http://doi.org/10.1016/j.bpj.2012.07.058
D.M. Chow , D. Sinefeld , K.E. Kolkman , D.G. Ouzounov , N. Akbari , R. Tatarsky , A. Bass , C. Xu , J.R. Fetcho , Deep three-photon imaging of the brain in intact adult zebrafish . Nat. Methods 17 , 605 - 608 ( 2020 ). http://doi.org/10.1038/s41592-020-0819-7 http://doi.org/10.1038/s41592-020-0819-7
N. Akbari , R.L. Tatarsky , K.E. Kolkman , J.R. Fetcho , A.H. Bass , C. Xu , Whole-brain optical access in a small adult vertebrate with two- and three-photon microscopy . iScience 25 , 105191 ( 2022 ). http://doi.org/10.1016/j.isci.2022.105191 http://doi.org/10.1016/j.isci.2022.105191
K. Choe , Y. Hontani , T. Wang , E. Hebert , D.G. Ouzounov , K. Lai , A. Singh , W. Béguelin , A.M. Melnick , C. Xu , Intravital three-photon microscopy allows visualization over the entire depth of mouse lymph nodes . Nat. Immunol. 23 , 330 - 340 ( 2022 ). http://doi.org/10.1038/s41590-021-01101-1 http://doi.org/10.1038/s41590-021-01101-1
G.J. Bakker , S. Weischer , J.F. Ortas , J. Heidelin , V. Andresen , M. Beutler , E. Beaurepaire , P. Friedl , Intravital deep-ŧumor single-beam 3-photon, 4-photon, and harmonic microscopy . Elife 11 , 1 - 23 ( 2022 ). http://doi.org/10.7554/eLife.63776 http://doi.org/10.7554/eLife.63776
H.A. Bounds , M. Sadahiro , W.D. Hendricks , M. Gajowa , K. Gopakumar , D. Quintana , B. Tasic , T.L. Daigle , H. Zeng , I.A. Oldenburg , H. Adesnik , Ultra-precise all-optical manipulation of neural circuits with multifunctional Cre-dependent transgenic mice . bioRxiv ( 2022 ). http://doi.org/10.1101/2021.10.05.463223 http://doi.org/10.1101/2021.10.05.463223
H. Dana , Y. Sun , B. Mohar , B.K. Hulse , A.M. Kerlin , J.P. Hasseman , G. Tsegaye , A. Tsang , A. Wong , R. Patel , J.J. Macklin , Y. Chen , A. Konnerth , V. Jayaraman , L.L. Looger , E.R. Schreiter , K. Svoboda , D.S. Kim , High-performance calcium sensors for imaging activity in neuronal populations and microcompartments . Nat. Methods 16 , 649 - 657 ( 2019 ). http://doi.org/10.1038/s41592-019-0435-6 http://doi.org/10.1038/s41592-019-0435-6
Y. Zhang , M. Rózsa , Y. Liang , D. Bushey , Z. Wei , J. Zheng , D. Reep , G.J. Broussard , A. Tsang , G. Tsegaye , S. Narayan , C.J. Obara , J.-X. Lim , R. Patel , R. Zhang , M.B. Ahrens , G.C. Turner , S.S.-H. Wang , W.L. Korff , E.R. Schreiter , K. Svoboda , J.P. Hasseman , I. Kolb , L.L. Looger , Fast and sensitive GCaMP calcium indicators for imaging neural populations . bioRxiv ( 2021 ). http://doi.org/10.1101/2021.11.08.467793 http://doi.org/10.1101/2021.11.08.467793
D. Li , Z. Hu , H. Zhang , Q. Yang , L. Zhu , Y. Liu , T. Yu , J. Zhu , J. Wu , J. He , P. Fei , W. Xi , J. Qian , D. Zhu , A Through-Intact-Skull (TIS) chronic window technique for cortical structure and function observation in mice . eLight 2 , 15 ( 2022 ). http://doi.org/10.1186/s43593-022-00022-2 http://doi.org/10.1186/s43593-022-00022-2
Y.J. Zhao , T.T. Yu , C. Zhang , Z. Li , Q.M. Luo , T.H. Xu , D. Zhu , Skull optical clearing window for in vivo imaging of the mouse cortex at synaptic resolution . Light Sci. Appl. 7 , 17153 ( 2018 ). http://doi.org/10.1038/lsa.2017.153 http://doi.org/10.1038/lsa.2017.153
C. Zhang , W. Feng , Y. Zhao , T. Yu , P. Li , T. Xu , Q. Luo , D. Zhu , A large, switchable optical clearing skull window for cerebrovascular imaging . Theranostics 8 , 2696 - 2708 ( 2018 ). http://doi.org/10.7150/thno.23686 http://doi.org/10.7150/thno.23686
G. Silasi , D. Xiao , M.P. Vanni , A.C.N. Chen , T.H. Murphy , Intact skull chronic windows for mesoscopic wide-field imaging in awake mice . J. Neurosci. Methods 267 , 141 - 149 ( 2016 ). http://doi.org/10.1016/j.jneumeth.2016.04.012 http://doi.org/10.1016/j.jneumeth.2016.04.012
A. Steinzeig , D. Molotkov , E. Castrén , Chronic imaging through “transparent skull” in mice . PLoS ONE 12 , e0181788 ( 2017 ). http://doi.org/10.1371/journal.pone.0181788 http://doi.org/10.1371/journal.pone.0181788
T. Wang , D.G. Ouzounov , C. Wu , N.G. Horton , B. Zhang , C.H. Wu , Y. Zhang , M.J. Schnitzer , C. Xu , Three-photon imaging of mouse brain structure and function through the intact skull . Nat. Methods 15 , 789 - 792 ( 2018 ). http://doi.org/10.1038/s41592-018-0115-y http://doi.org/10.1038/s41592-018-0115-y
Z. Qin , Z. She , C. Chen , W. Wu , J.K.Y. Lau , N.Y. Ip , J.Y. Qu , Deep tissue multi-photon imaging using adaptive optics with direct focus sensing and shaping . Nat. Biotechnol. 40 , 1663 - 1671 ( 2022 ). http://doi.org/10.1038/s41587-022-01343-w http://doi.org/10.1038/s41587-022-01343-w
E. Beaurepaire , J. Mertz , Epifluorescence collection in two-photon microscopy . Appl. Opt. 41 , 5376 - 5382 ( 2002 ). http://doi.org/10.1364/AO.41.005376 http://doi.org/10.1364/AO.41.005376
M. Pachitariu , C. Stringer , M. Dipoppa , S. Schröder , L.F. Rossi , H. Dalgleish , M. Carandini , K.D. Harris , Suite2p: beyond 10,000 neurons with standard two-photon microscopy . bioRxiv ( 2017 ). http://doi.org/10.1101/061507 http://doi.org/10.1101/061507
X. Li , G. Zhang , J. Wu , Y. Zhang , Z. Zhao , X. Lin , H. Qiao , H. Xie , H. Wang , L. Fang , Q. Dai , Reinforcing neuron extraction and spike inference in calcium imaging using deep self-supervised denoising . Nat. Methods 18 , 1395 - 1400 ( 2021 ). http://doi.org/10.1038/s41592-021-01225-0 http://doi.org/10.1038/s41592-021-01225-0
T. Wang , C. Wu , D.G. Ouzounov , W. Gu , F. Xia , M. Kim , X. Yang , M.R. Warden , C. Xu , Quantitative analysis of 1300-nm three-photon calcium imaging in the mouse brain . Elife 9 , e53205 ( 2020 ). http://doi.org/10.7554/eLife.53205 http://doi.org/10.7554/eLife.53205
N. Vladimirov , Y. Mu , T. Kawashima , D.V. Bennett , C.T. Yang , L.L. Looger , P.J. Keller , J. Freeman , M.B. Ahrens , Light-sheet functional imaging in fictively behaving zebrafish . Nat. Methods 11 , 883 - 884 ( 2014 ). http://doi.org/10.1038/nmeth.3040 http://doi.org/10.1038/nmeth.3040
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